Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801996.1_cds_XP_016477761.1_6919
CDS Infomation

[gene=LOC107799185] [db_xref=GeneID:107799185] [protein=WD repeat-containing protein 44-like] [protein_id=XP_016477761.1] [location=complement(join(6882..7414,7680..7773,7870..7949,8451..8502,8602..8759,8875..8965,9058..10218))] [gbkey=CDS]
Sequence

ATGGGTAGCTTCAGTGATGATGATGAAAAATGTGTATTTTTTGATGCCTCTGAGAACATT
GGTCACTTCTCTGATTTGGGTTCCAACTACCATCATCCCCAGGTGCTCAAGTCTAGCTCA
AGAACTGATAATTGTGTCACCAGTAGCTACCCCTATGATGTGTGGACTACAAGTCTTACC
ACTGTTACAGAGCGCCGAAGGAAATTCTTTAGTTGGATGGACTTACACGTAAATGATGGA
GAAGATCCAGTGACTGTATATGGGAATTTTGATTTATCTACTTGTGAGATTGAACGGATT
TTGGACAATAGTGAGGCTATGTGGCCAACCTCAATTCTTAAAGACGATTTTCCTTCTGAT
TTGCCTGTTGGAGTTTTGGGTTCATATAAAGAGTTGGATTCAAATGAAACATTTCTTTTT
CGGCATGGTAATCCACTTGGTGGAAGCGACTGCAATGCACATAATCTGGCTGAGAATAGC
CACAAAACTGTGAAATTGGAACGACAGTTGATGTCTAGTGAGCCTGAGGACTCATATATG
TCCCCCAAAATTCAGCAAATTGGACTGCGGGAATTAGAGGTCAGTGGATATGCTGGGAGG
AAACTGAACCGGGTCAAGAGCCGTTTGTTAAGTAAATTGCGATCACTGACGTGCATTGTA
AATGGCAAAGGGAGAGGTAACAATGTGAAGGCCGACATCAGCTCCAGCCTTGTTCAAAGG
TCTAGAGTTCAGAGGGTTAAGGTTCACCACCGCAAGAAGCGATTAAAGGAGCTCTCCGCT
CTTTTTGTGGAGCAAGATATCCAGGCTCATAAAGGTTCAATCTTAACTATGAAATTCAGT
CTTGATGGGCAATACTTAGCCAGTGCTGGTGAAGATAAGATTTTGCGTGTATGGAAAGTG
GTGGAAGACGAGAGATCCAACGAAATTGACATTCTAGAGTTGGATCCGTCTTGCATGTAC
TTCTCGATGAACCATCAATCCCAACTGTCTCCTTTGGTGACAGAGAAAGAGAGAATCAAT
AAATTGAGGGGCCTAAAGAAAACAACAGAATCGTCCTGTGTTATTTTCCCTCCTAAGGTC
TTTCGGATTTTGGAAGAACCGCTGCATGTGTTCGAAGGACATAGTGGGGAGATATTGGAT
GTTTCATGGTCAAAGAACAACTATTTGCTTTCATCATCAACAGACAAAACTGTTCGTCTG
TGGCAAGTTGGATGTGATAAATGCCTCAAAATTTTTTCACACAGTAATTATGTAACTTCC
ATACAATTTAATCCAGTAAATGATGATTACTTCATCAGTGGTTCATTAGATGGAAAAGTT
CGCATTTGGGCGATTAATAGATGTCAAGTTGTGGATTGGAAAGATATAAGAGACATTGTG
ACTGCTGTATCGTACCGTCCTGATGGGAAGGGTGGGATTATTGGCTCTATGGCAGGGGCG
TGTTGCTTCTTTAGTTTAATAGATCACAAGATCCAACTGGAGGAGCAGATGTCATTGGGC
AGTAAGAAGAAGTCACTTTGCAAAAGAATTAGTGGCTTTCAGTTTCTACCAGAAGACCCA
ACTAAAGTAATTGTTACTTGTGCTGACTCCCAAGTAAGAATCCTTAGTGGGATCAATGTG
ATCGGCAAGTGCAGAGGCCTAAGAAATGCAGGAAGCCATCTCTCTGCTGCTTTCACCTCA
GATGGGAAGCATATTATCTCTGCGTCTGAAGATTCTAATGTCTATCTATGGAACTTCCAC
ATTCCAGAAGAGTCTTCTGTGTCTCAACCTGGAACATTGAGTTCATTTGAGTTCTTCAAT
GGCGATGCGACCATTGCAATACCTTGGTCTGGTTTGAAAAATGTCAACCATGAAAACCGG
TGTCACTCACAAGGACTAAGTCAAAGCTTAACAAATTTCCCGTTCCCTGCTTCTCCTTGG
TTCTCTTTAGGACAAGAGTTGTTCTTAGAGGCAATTCCCAAGGGATCTGCAACCTGGCCT
GAAGAGAAGCTCCCTGTGTCACATCCTCGGTCTGTGCCTTCTGCAATGTGTAAATCTCAT
TACAAGTTTCTGAAACTTTCTTGCCAGAGTTCATCCCGTTCTCATGCCTGGGGTTTAGTT
ATTGTTACTGCAGGCTATGATGGGCGAATAAGGTCATTTCATAATTATGGATTGCCTTCG
CCACTTTGA

Peptide Sequence

PEP ID

XP_016477761.1
PEP Infomation

PREDICTED: WD repeat-containing protein 44-like [Nicotiana tabacum]
Sequence

MGSFSDDDEKCVFFDASENIGHFSDLGSNYHHPQVLKSSSRTDNCVTSSYPYDVWTTSLT
TVTERRRKFFSWMDLHVNDGEDPVTVYGNFDLSTCEIERILDNSEAMWPTSILKDDFPSD
LPVGVLGSYKELDSNETFLFRHGNPLGGSDCNAHNLAENSHKTVKLERQLMSSEPEDSYM
SPKIQQIGLRELEVSGYAGRKLNRVKSRLLSKLRSLTCIVNGKGRGNNVKADISSSLVQR
SRVQRVKVHHRKKRLKELSALFVEQDIQAHKGSILTMKFSLDGQYLASAGEDKILRVWKV
VEDERSNEIDILELDPSCMYFSMNHQSQLSPLVTEKERINKLRGLKKTTESSCVIFPPKV
FRILEEPLHVFEGHSGEILDVSWSKNNYLLSSSTDKTVRLWQVGCDKCLKIFSHSNYVTS
IQFNPVNDDYFISGSLDGKVRIWAINRCQVVDWKDIRDIVTAVSYRPDGKGGIIGSMAGA
CCFFSLIDHKIQLEEQMSLGSKKKSLCKRISGFQFLPEDPTKVIVTCADSQVRILSGINV
IGKCRGLRNAGSHLSAAFTSDGKHIISASEDSNVYLWNFHIPEESSVSQPGTLSSFEFFN
GDATIAIPWSGLKNVNHENRCHSQGLSQSLTNFPFPASPWFSLGQELFLEAIPKGSATWP
EEKLPVSHPRSVPSAMCKSHYKFLKLSCQSSSRSHAWGLVIVTAGYDGRIRSFHNYGLPS
PL

Transcript Sequence

Gene sequence data has not been registered.